Bird communities as bioindicator of environment quality of urban areas

Urbanization is increasing across the globe, and urban areas constitute one of the fastest growing land-use types. Several studies highlighted how biodiversity plays an important role in conserving ecosystem function and how urbanization reduces the resilience of ecosystems. However, approaches focused on different and complementary biodiversity measures are needed to understand how specific elements of urbanization impacts biodiversity.

Urban green, Marche, Central Italy photo Federico MorelliUrban green, Marche, Central Italy, photo Federico Morelli

The team headed by doc. Federico Morelli carried out the GACR project “Effects of urbanization on multilevel avian diversity: linking bird community metrics to pollution level, vegetation and building density”. The project’s main objective was to assess the impact of specific elements of urbanization on multiple facets of biodiversity, targeting bird communities. Field data collection in 16 different European cities, geospatial analysis, and modelling procedures were conducted from 2018 to 2020 to provide new insights on identifying high environmental quality areas in European cities.

Emberiza citinella in Poland photo C. KorkoszEmberiza citinella in Poland, photo C. Korkosz

“We mapped the local characteristics of the cities in terms of land use composition, building structure, as well as type and amount of vegetation in the urban greenery. Additionally, we estimated the level of environmental pollution (e.g., light and noise pollution). We found that some elements of urban greenery as grass, bush and trees are positively correlated with the number of bird species, while grass and trees, and the presence of water (rivers or urban streams), increased the phylogenetic diversity of avian communities,” says doc. Dr. Federico Morelli, Ph.D., and adds:  “On the opposite, all the main indicators of a high level of urbanization (e.g., building cover, number of building’ floors, pedestrian’s density and level of light pollution) increased the phylogenetic relatedness of species (how much the species in a given assemblage are close related in terms of evolution). Two species are more related if they have a more recent common ancestor. We can associate bird communities characterized by a high phylogenetic relatedness with more homogeneous assemblages, potentially less resilient if facing an ecological stress. Interestingly, the presence of bushes in the gardens and public green areas helped to mitigate this effect on the biotic homogenization.”

Urban green in Prague 6 photo Federico MorelliUrban green in Prague 6, photo Federico Morelli

The main importance of this project is related to the large spatial scale and international scope of the study, as well as the assessment of the impact of different components of urbanization on the taxonomic, functional, and phylogenetic diversity of urban bird assemblages. Specifically, the project considered building density, development of greenery, and environmental pollution including the influence of noise and artificial light at night. The final outcomes (see some examples in the web: www.urbanbiodiversity.net) may increase the basic knowledge concerning urban bird communities as bioindicator of the environment quality of urban areas, providing new valuable information for ecological and urban planning. We delivered a list of positive and negative effects of different urban characteristics on overall avian diversity, that can help to mitigate the continuous decline on biodiversity, especially marked in urban areas.

Passer domesticus italiae photo Fabio PrusciniPasser domesticus italiae photo Fabio Pruscini

“Finally, our findings suggest that maintaining adequate levels of avian diversity within the urban settlements can increase the potential resilience of urban ecosystems, exposed to the stress provoked by rapid and continuous changes. Last but not least, as highlighted in several previous studies, the conservation of urban biodiversity constitutes also a positive driver of citizens’ wellbeing,” says Morelli.

Federico Morelli photo Yanina BenedettiFederico Morelli, photo Yanina Benedetti

doc. Dr. Federico Morelli, Ph.D.
Community and Ecology Conservation Research Team

CULS – Czech University of Life Sciences

Federico Morelli is a quantitative ecologist, currently working as an associate professor at the Czech University of Life Sciences (Prague, Czech Republic). He has been involved in several European projects modeling the impact of land use and climate change on the spatial distribution of biodiversity. The focus of his research interest is macroecology, species distribution models, urban and road ecology, biodiversity spatial patterns, and bioindicators as a tool for conservation planning.

Text: CULS
Featured image: Urban development – La Defense, Paris, France, photo Federico Morelli

Czech Science Foundation Approves Funding for New Standard Projects

The Presidium of the Czech Science Foundation (“GACR”) has decided which standard projects to finance in the area of basic research in the upcoming year. Standard projects will be funded along with EXPRO, JUNIOR STAR, and international projects. Another 60 (approximately) projects will receive funding depending on the current availability of funds after partner organisations abroad carry out their evaluations.

“This year, we have seen scientists showing much greater interest in funding than they did in previous years. The volume of funding available from the state budget distributed through the Czech Science Foundation in support of Czech science is still the same, however: approximately CZK 4.2 billion (EUR 160 million). I wish to congratulate all those who have succeeded in the tight competition and are going to receive funding, and I look forward to the results of their explorations,” says RNDr. Alice Valkárová, DrSc., President of GACR, adding: “I do realise that the applicants who have not received funding for their projects may be disappointed, I will be happy if they don’t lose their love of science. First, they can still amend their projects and submit again next year. Second, we are continuously working on expanding grant schemes to tailor them to scientists’ needs as best we can. Among the recommendations we follow in this effort are those from the government’s R&D Council. In recent years, we have been able to establish several significant international partnerships, and there are more to come. Also last year, we financed EXPRO projects for the first time, and this year‘s calls for JUNIOR START projects were published for the first time. We are planning to open a new tender for POSTDOC INDIVIDUAL FELLOWSHIP next year. We are delighted that the Czech Science Foundation has been a long-term provider of grant funding whose contribution to the high level of Czech science is substantial – more than half the articles by Czech scientists which rank among the 1% most quoted ones worldwide have received funding from us.

Additional standard projects, on top of those listed below, can be financed depending on the funding decision for international projects in cooperation between the Czech Science Foundation and partner institutions abroad. That decision should be made in the Spring of 2021.

In recent years, the number of projects involving international cooperation has surged. New international projects received funding in the amount of CZK 33.5 million in 2018. The amount went up to CZK 57 million in 2019. And CZK 105.6 million this year. And the amount ear-marked by the Czech Science Foundation for such projects is even higher: CZK 200 million. At the moment, however, we still do not know which projects will receive funding – most of them are still awaiting an evaluation and/or approval by the partner organisation abroad. If the financial provision for international projects is not exhausted, it will be used for the funding of another 60 projects (approx.) We will reach out to inform such applicants in the Spring about funding possibilities for their projects starting in the second half of 2021,” adds Alice Valkárová.

The evaluations of standard projects takes place in three stages, and there are 400 experts involved. Each project proposal was evaluated by at least four independent experts in a given field. Over half of the best project proposals were then assessed by evaluators abroad – more than 99% project proposals have received at least two evaluations from abroad. You are welcome to learn more about the evaluation process for standard projects.

 

List of projects funded in *.pdf format (in Czech only)

 

In early November, the Czech Science Foundation published projects to receive funding from the EXPRO and JUNIOR STAR programmes. It also published a list of international projects recommended for funding.

Unique Research Has Showed the Benefits of Surface Treatment of Particles in Ceramics

Research dealing with the improvement of the properties of fine-grained advanced ceramics using cold plasma was rated as excellent by the Grant Agency of the Czech Republic. Group of experts from CEITEC BUT and the Faculty of Science of Masaryk University participated under the leadership of professor Karel Maca. The basic three-year research has discovered completely new contexts and researchers would therefore like to build on the success with follow-up projects.

The three-year project under the auspices of the Grant Agency of the Czech Republic named Physical surface activation of ceramic particles as a tool for improving the properties of fine-grained advanced ceramics was solved between years 2017-2019. The team of the Applied Plasmochemistry from Masaryk University first had to solve the issue of how to put the fine powders, which are necessary for the advanced ceramics production, into the proper contact with plasma. “Subsequently, we were solving how to characterize the changes that occur on the particles. We didn’t know what the plasma would do with the fine powders. And standard techniques such as infrared spectroscopy have proven unsuitable in this case. However, thermoluminescence and thermal desorption spectroscopy proved to be very useful, “described associate professor Jozef Ráheľ from Masaryk University

Experts from CEITEC BUT subsequently used the modified particles in combination with classical and modern ceramic technologies and investigated the possible benefits of this as yet untested procedure. Part of the research, led by Dr. Daniel Drdlík, was devoted to experiments with electrophoretic deposition of ceramic particles. “It turned out that thanks to the surface treatment of the particles, we can eliminate some of the necessary components in the suspensions used, which may be inherently unsuitable for the environment. We have also found that electrophoresis can serve as a diagnostic tool for examining the extent to which particles are affected. Thanks to this, we were able to determine how many particles were processed by the plasma,” specified Daniel Drdlík, stating that this finding may lead back to a modification of the design of the plasma technology.

Another group of researchers and students, led by Dr. Václav Pouchlý, tested how ceramics would behave during high-temperature firing. “We found that when we treat the surface of the particles, the material behaves differently when fired. In particular, when fired at normal temperature, it achieved better properties. In other words, in order to achieve the standard properties of ceramics, it was enough for us to burn them at lower temperatures, which is of course economically and energetically beneficial,“ Václav Pouchlý explained.

According to professor Maca the most important thing that the whole project showed is the fact that even a small change in surface properties can bring a macroscopic effect. “We are now working with this knowledge further,” concluded Maca. The researchers have therefore already applied for a follow-up project and hope to be able to develop their knowledge even further

Author: CEITEC VUT

SOUVISEJÍCÍ ČLÁNKY

The relationship between fish and bivalve molluscs is an excellent model system for studying survival and the risk of coexistence in a rapidly changing environment

The project dealt with various aspects of inter-population variability in the success rate of biological invasions and their impact on native species. Experimental and field studies in the areas of invasion and original occurrence were combined. Population genetic studies of both native and invasive species were also an important part of the project. The project was covered by the topic of the relationship between bitterling and host bivalve molluscs.

The most important discovery was the confirmation of the fundamental impact of inter-popular differences in the success of invasions, their impact, but also in the degree of vulnerability of native organisms. This finding may help to explain the known fact that some species may enter non-indigenous areas in the long term without any visible impact on native organisms. Suddenly, however, there is a dramatic change, after which this non-native species has significant negative impacts.

doc. RNDr. Martin Reichard, Ph.D.
Institute of Vertebrate Biology of the Czech Academy of Sciences

SOUVISEJÍCÍ ČLÁNKY

Compared to the situation in Western Europe and the USA, Czech suburbs are not at risk of segregation

During 2014 – 2016, the team led by doc. Martin Ouředníček, the Head of the Research Team of the Urban and Regional Laboratory and Vice-Dean of the Faculty of Science of the Charles University, carried out the GACR project “Dynamics of social environment and spatial mobility in metropolitan regions of the Czech Republic”. The main objective of the project was to examine the dynamics of the social environment, which is influenced by various types of spatial mobility, such as migration or commuting.

The research focused on processes taking place in outer parts of post-socialist cities: residential suburbanization and transformation of housing estates. These processes differ significantly from developments in Western Europe and the United States, and the Czech Republic is quite unique in many areas.

doc. RNDr. Martin Ouředníček, Ph.D.
Faculty of Science of the Charles University

SOUVISEJÍCÍ ČLÁNKY

The HelD protein is important for correct gene expression

The project “Deciphering the Cellular Role of HelD, a Helicase-like Protein Associated with Bacterial RNA Polymerase” was a follow-up to the previous project, which focused on the study of several proteins that interact with bacterial RNA polymerase (RNAP) – an enzyme that is crucial for transcription of DNA into RNA. In this previous project, HelD was discovered as a new RNAP interaction partner, and given the central role of RNAP for gene expression that determines a cell’s ability to adapt to environmental changes or pathogens to survive in the host, it was very attractive to further study this protein and to obtain new information on functioning of the transcriptional apparatus.

Mgr. Libor Krásný, Ph.D.
Institute of Microbiology of the Czech Academy of Sciences

SOUVISEJÍCÍ ČLÁNKY

The Czech Republic is one of the best in the world in the research of space asteroids

There are hundreds of thousands of known asteroids in the Solar System. We have detailed information on only a few thousand of them so far. The Czech Republic is a world power in creating models of these cosmic bodies. The GACR project “A big picture of the main asteroid belt – physical properties of asteroids derived by inversion of optical and infrared photometry” focused on the analysis of data on asteroids. The team led by doc. Mgr. Josef Ďurech, Ph.D., achieved to describe more than a thousand new cosmic bodies.

Model of planet Itokawa

In the area of asteroids modelling, the Czech Republic is the most productive in the world and these models are used by scientists around the world for further research and measurement. The results also serve for further basic research, for example to derive and obtain further information about the asteroid, such as its thermophysical parameters etc.

doc. Mgr. Josef Ďurech, Ph.D.
Astronomical Institute of Charles University

SOUVISEJÍCÍ ČLÁNKY

The project results can be used in the fields of electronics or tissue engineering

Most of us perhaps know that we divide burns by intensity into four basic groups. Even though extensive burns can be fatal, modern ways of treatment greatly improved the treatment results. Scientists are currently working on full replacement of the burnt skin.

One of them is Ing. Alena Řezníčková Ph.D., who has been dealing with this task for three years as part of the project “Physically deposited and anchored metal nanostructures on solid substrate”. The main objective of the project was to modify the surface of the sample, polymer or glass, using physical and chemical methods to improve its properties for medical and electronics applications. The polymeric substrate itself is inert and therefore not suitable for other applications.

Ing. Alena Řezníčková Ph.D.

Ing. Alena Řezníčková Ph.D.
Department of Solid State Engineering

SOUVISEJÍCÍ ČLÁNKY

GACR President’s award for excellent research 2019

Five Principal Investigators of the top basic research projects received the GACR President’s Award 2019. In contrast to last year, when one female investigator was awarded, male investigators dominated this year’s award.

Zdeněk Sofer succeeded with a project investigating the application of ion beams for modifications of graphene-based structures. Jiří Bruthans examined the effect of gravity-induced stress on sandstone erosion. Marek Mráz’s project focused on studying the regulation of B cell receptor (BCR) signalling pathway by microRNAs. Laureate Václav Štětka analysed the role of social media in transformation of political communication and citizen participation in the Czech Republic. Another laureate, Robert Černý, focused on oro-pharyngeal interface during vertebrate primary mouth formation. The GACR presidium decided on the winners among dozens of different projects.

“Yet again, choosing the best projects has been extremely difficult this year. We face the challenge of selecting the best projects among dozens of projects every year. On the other hand, it is a good message on how brilliant scientists in our country are. Congratulations to award winners, their projects were indeed excellent,” Alice Valkárová, the GACR president, stated.

The GACR President’s Award was established in 2003. Since then, 69 awards have been given in response to the excellent results in carrying out basic research projects supported by GACR. This year’s five awarded projects were selected out of 448 projects that ended last year, based on proposals of the respective discipline committees. The GACR presidium decided on the final selection of projects for the GACR President’s Award this April.

The prize is awarded for excellent results in basic research projects that had been supported by GACR. The Principal Investigators of the chosen projects and their co-workers receive a financial reward. Every year, the award goes to four to five Principal Investigators, whose projects were completed in the previous year, received a nomination for the award and acquired excellent evaluation by expert advisory bodies.

SOUVISEJÍCÍ ČLÁNKY

Determination of chemical molecular structure, the chirality and the electronegativity of atom

doc. Ing. Pavel Jelínek, Ph.D.

Doc. Ing. Pavel Jelínek, Ph.D. from the Institute of Physics of the Czech Academy of Sciences together with his team was able to differentiate chemical structure of molecules on the surface of solid substance. The scientist developed comprehensive physical mechanism theory of this scanning. The key for obtaining this sub-molecular contrast is the placement of one molecule (e.g. carbon monoxide) or atom at the end of the metallic probe. The presence of the flexible particle at the end of the probe causes the strengthening of the signal which then enables to achieve unprecedented resolution of the molecules. This new method also proved the validity of the equation of the Nobel Prize winner Linus Pauling for the covalent bond from the 1930s.

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